open access publication

Article, 2024

Proceedings of the EuBIC-MS developers meeting 2023

Journal of Proteomics, ISSN 1874-3919, 1876-7737, Volume 305, Page 105246, 10.1016/j.jprot.2024.105246

Contributors

Beltrao, Pedro 0000-0002-2724-7703 [1] Van Den Bossche, Tim 0000-0002-5916-2587 [2] [3] Gabriels, Ralf 0000-0002-1679-1711 [2] [3] Holstein, Tanja 0000-0002-1552-1453 [2] [3] Kockmann, Tobias 0000-0002-1847-885X [4] Nameni, Alireza [2] [3] Panse, Christian 0000-0003-1975-3064 (Corresponding author) [4] [5] Schlapbach, Ralph 0000-0002-7488-4262 [4] Lautenbacher, Ludwig 0000-0002-1540-5911 [6] Mattanovich, Matthias 0000-0001-7561-7898 [7] Nesvizhskii, Alexey I 0000-0002-2806-7819 [8] Van Puyvelde, Bart 0000-0002-7368-1762 [3] Scheid, Jonas 0000-0002-5923-1343 [9] [10] Schwämmle, Veit Stefan 0000-0002-9708-6722 [11] Strauss, Maximilian T 0000-0003-3320-6833 [7] Susmelj, Anna Klimovskaia 0000-0002-1057-6690 [1] [12] The, Matthew 0000-0002-5401-5553 [6] Webel, Henry Emanuel 0000-0001-8833-7617 [7] Wilhelm, Mathias 0000-0002-9224-3258 [6] Winkelhardt, Dirk 0000-0001-8770-2221 [13] Wolski, Witold E [4] [5] Xi, Muyao [7]

Affiliations

  1. [1] ETH Zurich
    2. [NORA names: Switzerland; Europe, Non-EU; OECD];
  2. [2] VIB-UGent Center for Medical Biotechnology
    3. [NORA names: Belgium; Europe, EU; OECD];
  3. [3] Ghent University
    4. [NORA names: Belgium; Europe, EU; OECD];
  4. [4] University of Zurich
    5. [NORA names: Switzerland; Europe, Non-EU; OECD];
  5. [5] Swiss Institute of Bioinformatics
    6. [NORA names: Switzerland; Europe, Non-EU; OECD];

Abstract

The 2023 European Bioinformatics Community for Mass Spectrometry (EuBIC-MS) Developers Meeting was held from January 15th to January 20th, 2023, in Congressi Stefano Franscin at Monte Verità in Ticino, Switzerland. The participants were scientists and developers working in computational mass spectrometry (MS), metabolomics, and proteomics. The 5-day program was split between introductory keynote lectures and parallel hackathon sessions focusing on "Artificial Intelligence in proteomics" to stimulate future directions in the MS-driven omics areas. During the latter, the participants developed bioinformatics tools and resources addressing outstanding needs in the community. The hackathons allowed less experienced participants to learn from more advanced computational MS experts and actively contribute to highly relevant research projects. We successfully produced several new tools applicable to the proteomics community by improving data analysis and facilitating future research.

Keywords

Artificial, European, European Bioinformatics Community, Monte, Switzerland, Ticino, VERITAS, analysis, area, artificial intelligence, bioinformatics, bioinformatics community, bioinformatics tools, community, computational mass spectrometry, data analysis, development, direction, experts, future directions, hackathons, improving data analysis, intelligence, keynote lecture, lecture, mass spectrometry, metabolomics, omics areas, participants, proceedings, program, project, proteomics, proteomics community, relevant research projects, research, research project, resources, scientists, sessions, spectrometry, tools

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