open access publication

Preprint, 2024

Pepticinnamins N, O and P, cytotoxic non-ribosomal peptides from a Soil-Derived Streptomyces mirabilis P8-A2

ChemRxiv, ISSN 2573-2293, 10.26434/chemrxiv-2024-4gjgb

Contributors

Ding, Ling 0000-0001-8979-3104 [1] Mahmoud, Manar [1] Abboud, Maria Mahmoud [1] Maleckis, Matiss [1] Souza, Luciano D O 0000-0003-4260-8615 [2] Moreira, José Manuel Afonso 0000-0002-9944-1214 [2] Gotfredsen, Charlotte Held 0000-0002-7386-119X [1] Weber, Tilmann 0000-0002-8260-5120 [1]

Affiliations

  1. [1] Technical University of Denmark
  2. [NORA names: DTU Technical University of Denmark; University; Denmark; Europe, EU; Nordic; OECD];
  3. [2] University of Copenhagen
  4. [NORA names: KU University of Copenhagen; University; Denmark; Europe, EU; Nordic; OECD]

Abstract

Cinnamoyl moiety containing non-ribosomal peptides represented by pepticinnamin E, are a growing family of natural products isolated from different Streptomyces and possess diverse bioactivities. A soil bacterium Streptomyces mirabilis P8-A2 harbors a cryptic pepticinnamin biosynthetic gene cluster, producing azodyrecins as major products. Inactivation of the azodyrecin biosynthetic gene cluster by CRISPR-BEST base editing led to the activation and production of pepticinnamin E (1) and its analogues, pepticinnamins N, O and P (2-4), the structures of which were determined by detailed NMR spectroscopy, HRMS data, and Marfey´s reactions. These new compounds exerted modest growth inhibitory effect against the LNCaP and C4-2B prostate cancer lines, respectively, with pepticinnamin O being the most active.

Keywords

C4, HRMS, HRMS data, LNCaP, Marfey's reaction, NMR, NMR spectroscopy, Streptomyces, activity, analogues, base editing, bioactivities, biosynthetic gene cluster, cancer lines, cinnamoyl, cinnamoyl moiety, clusters, compounds, data, diverse bioactivities, editing, effect, gene cluster, growth, growth inhibitory effect, inactivation, inhibitory effect, lines, moiety, natural products, non-ribosomal peptides, pepticinnamin E, peptide, production, prostate, prostate cancer lines, reaction, soil, soil-derived, spectroscopy, structure

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