open access publication

Preprint, 2024

A frontier-orbital view of the initial steps of lytic polysaccharide monooxygenase reactions

ChemRxiv, ISSN 2573-2293, 10.26434/chemrxiv-2024-t2vz0

Contributors

Wieduwilt, Erna Katharina 0000-0002-5438-2652 [1] Lo Leggio, Leila 0000-0002-5135-0882 [2] Donovan HedegÄrd, Erik [1]

Affiliations

  1. [1] University of Southern Denmark
  2. [NORA names: SDU University of Southern Denmark; University; Denmark; Europe, EU; Nordic; OECD];
  3. [2] University of Copenhagen
  4. [NORA names: KU University of Copenhagen; University; Denmark; Europe, EU; Nordic; OECD]

Abstract

Lytic polysaccharide monooxygenases (LPMOs) are copper enzymes that oxidatively cleave the strong C-H bonds in recalcitrant polysaccharides, thereby playing a crucial role in biomass degradation. Recently, LPMOs have also been shown to be important for several pathogens. It is well established that the Cu(II) resting state of LPMOs is inactive, and the electronic structure of the active site needs to be altered to transform the enzyme into an active form. Whether this transformation occurs due to substrate binding or due to a unique priming reduction has remained speculative. Starting from four different crystal structures of the LPMO LsAA9 with well-defined oxidation states, we use a frontier molecular orbital approach to elucidate the initial steps of the LPMO reaction. We give an explanation for the requirement of the unique priming reduction and analyse electronic structure changes upon substrate binding. We further investigate how the presence of the substrate could facilitate an electron transfer from the copper active site to an H2O2 co-substrate. Our findings could help to control experimental LPMO reactions.

Keywords

C-H, C-H bonds, Cu(II, H2O2, LPMO reactions, active form, active site, approach, binding, biomass, biomass degradation, bonds, changes, co-substrate, copper, copper active site, copper enzymes, crystal, crystal structure, degradation, electron, electron transfer, electronic structure, electronic structure changes, enzyme, explanation, findings, form, initial steps, lytic polysaccharide monooxygenases, molecular orbital approach, monooxygenase, monooxygenase reactions, orbital approach, oxidation, oxidation state, pathogens, polysaccharide monooxygenases, polysaccharides, presence, prime reduction, reaction, recalcitrant polysaccharides, reduction, requirements, sites, state, steps, structural changes, structure, substrate, substrate binding, transfer, transformation, views

Funders

  • The Velux Foundations

Data Provider: Digital Science